Q: Magazine Issue 2 July 2020 | Page 5

FAST TURNAROUND TIME FOR SAMPLES From the outset, the lab has maintained a 24-hour turnaround time for samples. “The health department’s initial turnaround time was one to three days, but they got backlogged really quickly and that turned into five to seven days,” says Dr. Dominguez. “In the clinical realm, that timeline isn’t useful because we’re making decisions in real time about patient placements and use of protective equipment.” Waiting days for results would spend resources. A perpetually fast turnaround time was crucial, so they made sure to build efficiencies into their process. “It’s about how many runs you can do in a day,” he says. “We had to repurpose some instruments. We had to rethink our workflow in the lab. We had to retrain people and reorganize shifts, even ask part-time people to come in. It was a new way of thinking so we could run the assay multiple times a day and get results out as quickly as we possibly could. Our team really stepped up, and I’m so proud of them.” Diversifying their platform portfolio was also key. In other words, they acquired additional assays so they could run more samples and keep operation steady if they ran into a supply chain issue with one of the platforms. On March 26, they brought a second platform online through a company they’d already been in contact with when they were initially evaluating their LDT options. It’s a smaller platform, says Dr. Dominguez, running about eight samples at once. But it has a quicker turnaround time, so they’re able to run it 24 hours a day. On April 7, they brought a third platform online. It’s a higher throughput system, running about 94 samples per. But it has a longer turnaround time, roughly six hours from start to finish. “That one is really useful for the samples we’re getting from other hospitals,” he says. “We can batch those and run them all once and do a couple of runs a day if we need to.” A week later, they added a fourth platform. TESTING CAPACITY AND ITS IMPACT ON CARE As testing capacity increased, it helped the hospital enhance patient workflow so providers could continue to isolate and cohort patients and then quickly move those patients out of isolation when appropriate. There were ultimately three phases of testing, each linked to when the assays were brought online. Launch of the CDC assay was the start of Phase 1. All patients admitted to the A Children’s Colorado lab technologist pipettes samples in preparation for extraction of the nucleic acid. hospital with respiratory symptoms or a fever received a respiratory pathogen panel, or RPP. If that was negative, the patient was flexed to the SARS-COV-2 test. While pending, that patient was a person under investigation and was cohorted on the hospital’s 9th floor. “While the number of patients coming in was still relatively low, that strategy helped us quickly rule out or isolate,” says Dr. Dominguez, “which meant we could reserve full PPE — gowns, masks, face shields — for those patients who were flexed.” As more patients came in that fit the criteria, though, they needed to morph the strategy. In Phase 2, they started testing everyone who had respiratory symptoms, regardless of RPP results, because coinfection was an increasing concern. “That raised the number of tests, but as we had more assays available, we could maintain our turnaround time and still efficiently manage the flow of patients in and out of the hospital. We kept them off that special floor and could get them out of those special isolations sooner, which further decreased our use of PPE.” On April 9, two days after they launched the third assay, Phase 3 went into effect. Every single patient who is admitted to the hospital, even Continued on the following page 5